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BIO903_1

Reaction Kinetic Modelling

This is the study programme for 2020/2021.


Reaction mechanisms and chemical rate equations, FORTRAN programming skills, stiffly stable algorithms for solving coupled first-order differential equations, Open Source program packages for solving reaction kinetic systems, graphical output programming, modelling enzyme kinetic systems, chemical oscillations, circadian rhythms, control coefficients and sensitivity analysis, modelling temperature-compensated systems.

Learning outcome

After having successfully completed the course the student should be able to:
  • understand how a FORTRAN program is build up and compiled
  • make programs which describe the rate equations for enzyme catalyzed reactions, chemical or biochemical oscillators as well as circadian rhythms
  • modelling of temperature compensated systems
  • do a sensitivity analysis of a reaction kinetic network

After having completed the course successfully, the student will have knowledge that can be applied in further studies and research projects, such as Master and PhD projects.

Contents

Reaction mechanisms and chemical rate equations, FORTRAN programming skills, stiffly stable algorithms for solving coupled first-order differential equations, Open Source program packages for solving reaction kinetic systems, graphical output programming, modelling enzyme kinetic systems, chemical oscillations, circadian rhythms, control coefficients and sensitivity analysis, modelling temperature-compensated systems.

Required prerequisite knowledge

None.

Exam

Weight Duration Marks Aid
Written assignment1/1 Pass - FailAll written and printed means are allowed. Calculators are allowed.

Course teacher(s)

Course coordinator
Heinz Peter Ruoff

Method of work

Overlapping courses

Course Reduction (SP)
Reaction Kinetic Modelling (DOF502_1) 15

Open to

Biological Chemistry - PhD

Course assessment

Form and/or discussion.

Literature


Link to reading list


This is the study programme for 2020/2021.

Sist oppdatert: 14.07.2020

History